IQ-TREE multicore version 2.0.3 for Linux 64-bit built Apr 26 2020
Developed by Bui Quang Minh, Nguyen Lam Tung, Olga Chernomor,
Heiko Schmidt, Dominik Schrempf, Michael Woodhams.

Host:    cn34 (AVX2, FMA3, 125 GB RAM)
Command: /home/smg655/.conda/envs/iqtree/bin/iqtree -t All_Species_m2_AllMapped_edited.nwk -s All_Species_m2_five_prime_UTR.nexus --scf 100 --prefix concord -T 2
Seed:    454056 (Using SPRNG - Scalable Parallel Random Number Generator)
Time:    Mon May  3 11:17:53 2021
Kernel:  AVX+FMA - 2 threads (2 CPU cores detected)

Reading alignment file All_Species_m2_five_prime_UTR.nexus ... Nexus format detected
Alignment has 26 sequences with 6517 columns, 4882 distinct patterns
6449 parsimony-informative, 0 singleton sites, 68 constant sites
        Gap/Ambiguity  Composition  p-value
   1  ActMar    1.93%    passed     99.31%
   2  AldGig    2.06%    passed     24.04%
   3  ApaSpi    3.01%    passed     46.84%
   4  BatTri   45.22%    passed     85.17%
   5  CarIns    7.79%    passed     85.52%
   6  CheAbi    6.03%    passed     39.30%
   7  CheMyd    0.86%    passed     96.35%
   8  CheSer    4.10%    passed     68.41%
   9  ChrPic    0.84%    passed     76.29%
  10  CuoAmb    2.61%    passed     90.24%
  11  CuoMcc    1.07%    passed     87.58%
  12  DerCor    1.20%    passed     17.01%
  13  DerMaw    2.16%    passed     87.26%
  14  EmyOrb   41.98%    passed     43.80%
  15  EmySub    1.93%    passed     56.83%
  16  GopAga    0.60%    passed     46.49%
  17  MalTer    6.97%    passed     61.87%
  18  MauRee    0.34%    passed     96.27%
  19  MesTub    3.30%    passed     96.23%
  20  PelCas    4.30%    passed     15.36%
  21  PelSin    2.50%    passed     59.52%
  22  PlaMeg    0.74%    passed     68.28%
  23  PodExp   11.60%    failed      0.07%
  24  SteCar    3.18%    passed     19.84%
  25  TerCar    1.86%    passed     90.25%
  26  TraScr    1.18%    passed     71.69%
****  TOTAL     6.13%  1 sequences failed composition chi2 test (p-value<5%; df=3)
Reading tree All_Species_m2_AllMapped_edited.nwk ...
un-rooted tree with 26 taxa and 49 branches
Computing site concordance factor...
0.072 sec
Tree with concordance factors written to concord.cf.tree
Annotated tree (best viewed in FigTree) written to concord.cf.tree.nex
Tree with branch IDs written to concord.cf.branch
Concordance factors per branch printed to concord.cf.stat
Date and Time: Mon May  3 11:17:53 2021
